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SRX5296602: GSM3580692: NT-LW-4C; Sus scrofa; RNA-Seq
1 ILLUMINA (HiSeq X Ten) run: 40.4M spots, 12.1G bases, 4.3Gb downloads

Submitted by: NCBI (GEO)
Study: Characterization and comparative analyses of transcriptomes of cloned and in vivo fertilized porcine pre-implantation embryos
show Abstracthide Abstract
By using RNA-Seq technology, we get genome-wide transcriptome profiles of cloned and in vivo fertilized porcine embryos, from the oocyte to the blastocyst stages. We identified differentially expressed genes between the cloned and in vivo fertilized embryos from distinct stages of development and uncovered associated cellular signaling pathways and upstream transcription factors. Overall design: We get transcriptome of cloned and in vivo fertilized porcine embryos in seven consecutive points in time. Our findings provided a valuable resource for further discovery of the epigenetic reprogramming mechanisms in pig embryos.
Sample: NT-LW-4C
SAMN10826830 • SRS4295645 • All experiments • All runs
Organism: Sus scrofa
Library:
Instrument: HiSeq X Ten
Strategy: RNA-Seq
Source: TRANSCRIPTOMIC
Selection: cDNA
Layout: PAIRED
Construction protocol: cDNA was generated and amplified with the SMART-Seq® v4 Ultra Low Input RNA Kit for Sequencing. RNA libraries were generated using NEBNext Ultra RNA Library Prep Kit.
Experiment attributes:
GEO Accession: GSM3580692
Links:
Runs: 1 run, 40.4M spots, 12.1G bases, 4.3Gb
Run# of Spots# of BasesSizePublished
SRR849203640,357,88812.1G4.3Gb2019-04-29

ID:
7170545

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